Periodontitis is associated with a type-1 interferon signature in peripheral blood neutrophils-GSE12484
Peripheral blood neutrophils from periodontitis patients exhibit a hyper-reactive and hyper-active phenotype (collectively termed hyper-responsivity) in terms of production of reactive oxygen species (ROS) however the molecular basis for this observation is yet to be determined. Our objectives were to identify genes differentially expressed in hyper-responsive peripheral blood neutrophils from chronic periodontitis patients relative to periodontally healthy controls and use this data to identify potential contributory pathways to the hyper-responsive neutrophil phenotype.
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Neutrophils taken from 4 chronic periodontitis patients and age/sex matched healthy controls. RNA extracted and subsequently hybridised in dulpicate on to U133A arrays.
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Sample ID | !Sample_title | cell type | RNA from 4 chronic periodontitis patients pooled | RNA from neutrophils from 4 chronic periodontitis patients pooled | treatment |
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GSM313630 | Healthy Neutrophils rep1 | unstimulated neutrophil | Healthy | ||
GSM313632 | Healthy Neutrophils rep2 | unstimulated neutrophil | Healthy | ||
GSM313634 | Periodontitis Neutrophils rep1 | True | Periodontitis | ||
GSM313636 | Periodontitis Neutrophils rep2 | True | Periodontitis |
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Sample ID | !Sample Title | Cell type | RNA from 4 chronic periodontitis patients pooled | RNA from neutrophils from 4 chronic periodontitis patients pooled | Treatment |
---|---|---|---|---|---|
GSM313630 | Healthy Neutrophils rep1 |
unstimulated neutrophil |
Healthy |
||
GSM313632 | Healthy Neutrophils rep2 |
unstimulated neutrophil |
Healthy |
||
GSM313634 | Periodontitis Neutrophils rep1 |
True |
Periodontitis |
||
GSM313636 | Periodontitis Neutrophils rep2 |
True |
Periodontitis |
Name | ||
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