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Integrated pathways for neutrophil recruitment and inflammation in leprosy-GSE16844

Purpose

Neutrophil recruitment is pivotal to host defense against microbial infection, but also contributes to the immunopathology of disease. We investigated the mechanism of neutrophil recruitment in human infectious disease by bioinformatic pathways analysis of the gene expression profiles in the skin lesions of leprosy. In erythema nodosum leprosum (ENL), which occurs in patients with lepromatous leprosy (L-lep), and is characterized by neutrophil infiltration in lesions, the most overrepresented biologic functional group was 'cell movement' including E-selectin, which was coordinately regulated with IL-1beta. In vitro activation of TLR2, upregulated in ENL lesions, triggered induction of IL-1beta, which together with IFN-gamma, induced E-selectin expression on, and neutrophil adhesion to endothelial cells. Thalidomide, an effective treatment for ENL, inhibited this neutrophil recruitment pathway. The gene expression profile of ENL lesions comprised an integrated pathway of TLR2/FcR activation, neutrophil migration and inflammation, providing insight into mechanisms of neutrophil recruitment in human infectious disease.

Hypothesis

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Experimental Design

6 ENL skin lesions and 7 Lepromatous leprosy skin lesions

Experimental Variables

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Controls

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Methods

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Additional Information
  • Lee DJ, Li H, Ochoa MT, Tanaka M et al. Integrated pathways for neutrophil recruitment and inflammation in leprosy. J Infect Dis 2010 Feb 15;201(4):558-69. PMID: 20070238
  • Microarray
    Affymetrix HG-U133_Plus_2
    13 Samples Loaded: 13
    Human (Homo sapiens)
    Neutrophils
    Leprosy
    Sample Set Spreadsheet
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    Samples Preview
    Sample ID !Sample_title tissue Conditions
    GSM421937 ENL1 skin lesion ENL
    GSM421938 ENL2 skin lesion ENL
    GSM422232 LL1 skin lesion LL
    GSM422233 LL2 skin lesion LL
    GSM422234 LL3 skin lesion LL
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    File
    sampleset4000036_sampleannotations.csv
    Sample Set Spreadsheet
    Raw Signal
    Raw Signal
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    Sample ID !Sample Title Tissue Conditions
    GSM421937
    ENL1
    skin lesion
    ENL
    GSM421938
    ENL2
    skin lesion
    ENL
    GSM422232
    LL1
    skin lesion
    LL
    GSM422233
    LL2
    skin lesion
    LL
    GSM422234
    LL3
    skin lesion
    LL
    GSM422243
    LL4
    skin lesion
    LL
    GSM422263
    LL5
    skin lesion
    LL
    GSM422264
    LL6
    skin lesion
    LL
    GSM422265
    ENL3
    skin lesion
    ENL
    GSM422278
    ENL4
    skin lesion
    ENL
    GSM422279
    ENL5
    skin lesion
    ENL
    GSM422290
    ENL6
    skin lesion
    ENL
    GSM422291
    LL7
    skin lesion
    LL

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