Gene expression data from S. aureus-exposed neutrophils-GSE16837
Neutrophil lysis after phagocytosis is a process potentially important in the pathogenesis of community-associated methicillin-resistant S. aureus (CA-MRSA) infection. The mechanism for this process is not currently known. Therefore, to better understand CA-MRSA virulence we used human oligonucleotide microarrays to investigate the mechanism underlying enhanced PMN lysis that occurs after phagocytosis of CA-MRSA.In order to examine the effect of S. aureus on the neutrophil transcriptome and to elucidate any possible differences in this effect between hospital- and community-associated S. aureus, we performed microarray expression analysis on human neutrophils treated with hospital- and community-associated S. aureus.
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Polymorphonuclear leukocytes (PMNs) were isolated from the blood of healthy donors. Control and S. aureus-exposed PMNs were incubated at 37C for 1, 2, 3 or 6 hours.
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Sample ID | !Sample_title | cell type | time | treatment | Cuture conditions |
---|---|---|---|---|---|
GSM422118 | PMN 0hr ctrl 1 | polymorphnuclear leukocytes | 0 | control | CTRL_T0 |
GSM422119 | PMN 0hr ctrl 2 | polymorphnuclear leukocytes | 0 | control | CTRL_T0 |
GSM422120 | PMN 0hr ctrl 3 | polymorphnuclear leukocytes | 0 | control | CTRL_T0 |
GSM422121 | PMN 0hr ctrl 4 | polymorphnuclear leukocytes | 0 | control | CTRL_T0 |
GSM422122 | PMN 1hr Col 1 | polymorphnuclear leukocytes | 1 | treated with S. aureus strain Col | SA_CTRL_T1 |
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Sample ID | !Sample Title | Cell type | Time | Treatment | Cuture conditions |
---|---|---|---|---|---|
GSM422118 | PMN 0hr ctrl 1 |
polymorphnuclear leukocytes |
0 |
control |
CTRL_T0 |
GSM422119 | PMN 0hr ctrl 2 |
polymorphnuclear leukocytes |
0 |
control |
CTRL_T0 |
GSM422120 | PMN 0hr ctrl 3 |
polymorphnuclear leukocytes |
0 |
control |
CTRL_T0 |
GSM422121 | PMN 0hr ctrl 4 |
polymorphnuclear leukocytes |
0 |
control |
CTRL_T0 |
GSM422122 | PMN 1hr Col 1 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain Col |
SA_CTRL_T1 |
GSM422123 | PMN 1hr Col 2 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain Col |
SA_CTRL_T1 |
GSM422124 | PMN 1hr Col 3 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain Col |
SA_CTRL_T1 |
GSM422125 | PMN 1hr Col 4 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain Col |
SA_CTRL_T1 |
GSM422126 | PMN 1hr ctrl 1 |
polymorphnuclear leukocytes |
1 |
control |
CTRL_T1 |
GSM422127 | PMN 1hr ctrl 2 |
polymorphnuclear leukocytes |
1 |
control |
CTRL_T1 |
GSM422128 | PMN 1hr ctrl 3 |
polymorphnuclear leukocytes |
1 |
control |
CTRL_T1 |
GSM422129 | PMN 1hr ctrl 4 |
polymorphnuclear leukocytes |
1 |
control |
CTRL_T1 |
GSM422130 | PMN 1hr 10254 1 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 10254 |
SA10254_T1 |
GSM422131 | PMN 1hr 10254 2 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 10254 |
SA10254_T1 |
GSM422132 | PMN 1hr 10254 3 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 10254 |
SA10254_T1 |
GSM422133 | PMN 1hr 10254 4 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 10254 |
SA10254_T1 |
GSM422134 | PMN 1hr 11490 1 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 11490 |
SA11490_T1 |
GSM422135 | PMN 1hr 11490 2 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 11490 |
SA11490_T1 |
GSM422136 | PMN 1hr 11490 3 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 11490 |
SA11490_T1 |
GSM422137 | PMN 1hr 11490 4 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 11490 |
SA11490_T1 |
GSM422138 | PMN 1hr 252 1 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 252 |
SA252_T1 |
GSM422139 | PMN 1hr 252 2 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 252 |
SA252_T1 |
GSM422140 | PMN 1hr 252 3 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 252 |
SA252_T1 |
GSM422141 | PMN 1hr 252 4 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 252 |
SA252_T1 |
GSM422142 | PMN 1hr 9897 1 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 9897 |
SA9897_T1 |
GSM422143 | PMN 1hr 9897 2 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 9897 |
SA9897_T1 |
GSM422144 | PMN 1hr 9897 3 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 9897 |
SA9897_T1 |
GSM422145 | PMN 1hr 9897 4 |
polymorphnuclear leukocytes |
1 |
treated with S. aureus strain 9897 |
SA9897_T1 |
GSM422146 | PMN 1hr LB 1 |
polymorphnuclear leukocytes |
1 |
treated with latex beads |
CTRL_LB_T1 |
GSM422147 | PMN 1hr LB 2 |
polymorphnuclear leukocytes |
1 |
treated with latex beads |
CTRL_LB_T1 |
GSM422148 | PMN 1hr LB 3 |
polymorphnuclear leukocytes |
1 |
treated with latex beads |
CTRL_LB_T1 |
GSM422149 | PMN 1hr LB 4 |
polymorphnuclear leukocytes |
1 |
treated with latex beads |
CTRL_LB_T1 |
GSM422150 | PMN 2hr Col 1 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain Col |
SA_CTRL_T2 |
GSM422151 | PMN 2hr Col 3 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain Col |
SA_CTRL_T2 |
GSM422152 | PMN 2hr Col 4 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain Col |
SA_CTRL_T2 |
GSM422153 | PMN 2hr ctrl 1 |
polymorphnuclear leukocytes |
2 |
control |
CTRL_T2 |
GSM422154 | PMN 2hr ctrl 2 |
polymorphnuclear leukocytes |
2 |
control |
CTRL_T2 |
GSM422155 | PMN 2hr ctrl 3 |
polymorphnuclear leukocytes |
2 |
control |
CTRL_T2 |
GSM422156 | PMN 2hr ctrl 4 |
polymorphnuclear leukocytes |
2 |
control |
CTRL_T2 |
GSM422157 | PMN 2hr 10254 1 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 10254 |
SA10254_T2 |
GSM422158 | PMN 2hr 10254 2 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 10254 |
SA10254_T2 |
GSM422159 | PMN 2hr 10254 3 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 10254 |
SA10254_T2 |
GSM422160 | PMN 2hr 10254 4 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 10254 |
SA10254_T2 |
GSM422161 | PMN 2hr 11490 1 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 11490 |
SA11490_T2 |
GSM422162 | PMN 2hr 11490 2 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 11490 |
SA11490_T2 |
GSM422163 | PMN 2hr 11490 3 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 11490 |
SA11490_T2 |
GSM422164 | PMN 2hr 11490 4 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 11490 |
SA11490_T2 |
GSM422165 | PMN 2hr 252 1 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 252 |
SA252_T2 |
GSM422166 | PMN 2hr 252 2 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 252 |
SA252_T2 |
GSM422167 | PMN 2hr 252 3 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 252 |
SA252_T2 |
GSM422168 | PMN 2hr 252 4 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 252 |
SA252_T2 |
GSM422169 | PMN 2hr 9897 1 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 9897 |
SA9897_T2 |
GSM422170 | PMN 2hr 9897 2 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 9897 |
SA9897_T2 |
GSM422171 | PMN 2hr 9897 3 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 9897 |
SA9897_T2 |
GSM422172 | PMN 2hr 9897 4 |
polymorphnuclear leukocytes |
2 |
treated with S. aureus strain 9897 |
SA9897_T2 |
GSM422173 | PMN 2hr LB 1 |
polymorphnuclear leukocytes |
2 |
treated with latex beads |
CTRL_LB_T2 |
GSM422174 | PMN 2hr LB 2 |
polymorphnuclear leukocytes |
2 |
treated with latex beads |
CTRL_LB_T2 |
GSM422175 | PMN 2hr LB 3 |
polymorphnuclear leukocytes |
2 |
treated with latex beads |
CTRL_LB_T2 |
GSM422176 | PMN 2hr LB 4 |
polymorphnuclear leukocytes |
2 |
treated with latex beads |
CTRL_LB_T2 |
GSM422177 | PMN 3hr Col 1 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain Col |
SA_CTRL_T3 |
GSM422178 | PMN 3hr Col 2 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain Col |
SA_CTRL_T3 |
GSM422179 | PMN 3hr Col 3 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain Col |
SA_CTRL_T3 |
GSM422180 | PMN 3hr Col 4 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain Col |
SA_CTRL_T3 |
GSM422181 | PMN 3hr ctrl 1 |
polymorphnuclear leukocytes |
3 |
control |
CTRL_T3 |
GSM422182 | PMN 3hr ctrl 2 |
polymorphnuclear leukocytes |
3 |
control |
CTRL_T3 |
GSM422183 | PMN 3hr ctrl 3 |
polymorphnuclear leukocytes |
3 |
control |
CTRL_T3 |
GSM422184 | PMN 3hr ctrl 4 |
polymorphnuclear leukocytes |
3 |
control |
CTRL_T3 |
GSM422185 | PMN 3hr 10254 1 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 10254 |
SA10254_T3 |
GSM422186 | PMN 3hr 10254 2 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 10254 |
SA10254_T3 |
GSM422187 | PMN 3hr 10254 3 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 10254 |
SA10254_T3 |
GSM422188 | PMN 3hr 10254 4 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 10254 |
SA10254_T3 |
GSM422189 | PMN 3hr 11490 1 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 11490 |
SA11490_T3 |
GSM422190 | PMN 3hr 11490 2 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 11490 |
SA11490_T3 |
GSM422191 | PMN 3hr 11490 3 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 11490 |
SA11490_T3 |
GSM422192 | PMN 3hr 11490 4 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 11490 |
SA11490_T3 |
GSM422193 | PMN 3hr 252 1 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 252 |
SA252_T3 |
GSM422194 | PMN 3hr 252 3 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 252 |
SA252_T3 |
GSM422195 | PMN 3hr 252 4 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 252 |
SA252_T3 |
GSM422196 | PMN 3hr 9897 1 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 9897 |
SA9897_T3 |
GSM422197 | PMN 3hr 9897 2 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 9897 |
SA9897_T3 |
GSM422198 | PMN 3hr 9897 3 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 9897 |
SA9897_T3 |
GSM422199 | PMN 3hr 9897 4 |
polymorphnuclear leukocytes |
3 |
treated with S. aureus strain 9897 |
SA9897_T3 |
GSM422200 | PMN 3hr LB 1 |
polymorphnuclear leukocytes |
3 |
treated with latex beads |
CTRL_LB_T3 |
GSM422201 | PMN 3hr LB 2 |
polymorphnuclear leukocytes |
3 |
treated with latex beads |
CTRL_LB_T3 |
GSM422202 | PMN 3hr LB 3 |
polymorphnuclear leukocytes |
3 |
treated with latex beads |
CTRL_LB_T3 |
GSM422203 | PMN 3hr LB 4 |
polymorphnuclear leukocytes |
3 |
treated with latex beads |
CTRL_LB_T3 |
GSM422204 | PMN 6hr Col 1 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain Col |
SA_CTRL_T6 |
GSM422205 | PMN 6hr Col 2 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain Col |
SA_CTRL_T6 |
GSM422206 | PMN 6hr Col 3 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain Col |
SA_CTRL_T6 |
GSM422207 | PMN 6hr Col 4 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain Col |
SA_CTRL_T6 |
GSM422208 | PMN 6hr ctrl 1 |
polymorphnuclear leukocytes |
6 |
control |
CTRL_T6 |
GSM422209 | PMN 6hr ctrl 2 |
polymorphnuclear leukocytes |
6 |
control |
CTRL_T6 |
GSM422210 | PMN 6hr ctrl 3 |
polymorphnuclear leukocytes |
6 |
control |
CTRL_T6 |
GSM422211 | PMN 6hr ctrl 4 |
polymorphnuclear leukocytes |
6 |
control |
CTRL_T6 |
GSM422212 | PMN 6hr 10254 1 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 10254 |
SA10254_T6 |
GSM422213 | PMN 6hr 10254 2 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 10254 |
SA10254_T6 |
GSM422214 | PMN 6hr 10254 3 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 10254 |
SA10254_T6 |
GSM422215 | PMN 6hr 10254 4 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 10254 |
SA10254_T6 |
GSM422216 | PMN 6hr 11490 1 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 11490 |
SA11490_T6 |
GSM422217 | PMN 6hr 11490 2 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 11490 |
SA11490_T6 |
GSM422218 | PMN 6hr 11490 3 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 11490 |
SA11490_T6 |
GSM422219 | PMN 6hr 11490 4 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 11490 |
SA11490_T6 |
GSM422220 | PMN 6hr 252 1 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 252 |
SA252_T6 |
GSM422221 | PMN 6hr 252 2 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 252 |
SA252_T6 |
GSM422222 | PMN 6hr 252 3 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 252 |
SA252_T6 |
GSM422223 | PMN 6hr 252 4 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 252 |
SA252_T6 |
GSM422224 | PMN 6hr 9897 1 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 9897 |
SA9897_T6 |
GSM422225 | PMN 6hr 9897 2 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 9897 |
SA9897_T6 |
GSM422226 | PMN 6hr 9897 3 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 9897 |
SA9897_T6 |
GSM422227 | PMN 6hr 9897 4 |
polymorphnuclear leukocytes |
6 |
treated with S. aureus strain 9897 |
SA9897_T6 |
GSM422228 | PMN 6hr LB 1 |
polymorphnuclear leukocytes |
6 |
treated with latex beads |
CTRL_LB_T6 |
GSM422229 | PMN 6hr LB 2 |
polymorphnuclear leukocytes |
6 |
treated with latex beads |
CTRL_LB_T6 |
GSM422230 | PMN 6hr LB 3 |
polymorphnuclear leukocytes |
6 |
treated with latex beads |
CTRL_LB_T6 |
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